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Pull requests: DataBiosphere/azul

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Pull requests list

Promotion 2026-08-15 prod (#8232) backup:gitlab [process] PR requires backing up GitLab instances deploy:gitlab [process] PR requires deploying `gitlab` component deploy:runner [process] PR requires deploying `runner` component deploy:shared [process] PR requires deploying `shared` component no sandbox [process] PR will not be tested in the sandbox reindex:prod [process] PR requires reindexing prod
#8233 opened Aug 15, 2026 by hannes-ucsc Member Loading…
31 of 69 tasks
1
@hannes-ucsc
2
Fix: Inspector findings script mislabels GitLab instance (#8225)
#8231 opened Aug 14, 2026 by nadove-ucsc Contributor Loading… 100+
1
@hannes-ucsc @nadove-ucsc
3
LungMAP: Add names values to manifests when available for _id fields (#7917) reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#8230 opened Aug 14, 2026 by dsotirho-ucsc Contributor Loading… 100+
1
@hannes-ucsc @dsotirho-ucsc
4
No meaningful logs for manifest requests with execution tokens (#8202)
#8229 opened Aug 14, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
2
Fix: Frequent AccessDenied requests against manifest bucket from foreign VPC (#8118) deploy:shared [process] PR requires deploying `shared` component
#8228 opened Aug 14, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
4
Fix: Leaky validation (#8213, #7418, #8025) API API change affecting callers
#8226 opened Aug 13, 2026 by nadove-ucsc Contributor Loading… 100+
3
@hannes-ucsc @nadove-ucsc
3
Eliminate DUOS bundles, cache DUOS responses instead (#8087, #7813, #8036) partial [process] PR is does not completely resolve associated ticket reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod
#8220 opened Aug 11, 2026 by hannes-ucsc Member Loading… 100+
3
@hannes-ucsc
3
Permit log forwarder lambda to be invoked from mirror buckets (#8039) 0 reviews [process] Lead didn't request any changes partial [process] PR is does not completely resolve associated ticket
#8219 opened Aug 11, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
3
Remove sequencing processes from index (#3972) 1 review [process] Lead requested changes once reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#8188 opened Jul 23, 2026 by nadove-ucsc Contributor Loading… 100+
1
@hannes-ucsc @nadove-ucsc
10
Fix: OutOfMemory error in mirror Lambda function (#7730) reqs [process] PR includes commit requiring ``make requirements`` upgrade [process] PR includes commit requiring manual upgrade
#8137 opened Jun 24, 2026 by achave11-ucsc Member • Draft 100+
1
@hannes-ucsc
3
Organize curl downloads by dataset (#7926)
#8056 opened May 27, 2026 by dsotirho-ucsc Contributor • Draft 100+
1
@dsotirho-ucsc
3
Fix: Redundant implementations of file URLs and mirror URIs (#8042)
#8043 opened May 21, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
2
Fix: curl manifest futilely includes external LungMAP files (#8027) 4+ reviews [process] Lead requested changes four times or more partial [process] PR is does not completely resolve associated ticket
#8030 opened May 15, 2026 by nadove-ucsc Contributor Loading… 100+
1
@hannes-ucsc @nadove-ucsc
35
Cover query service with mypy (#6821) 1 review [process] Lead requested changes once partial [process] PR is does not completely resolve associated ticket
#7916 opened Apr 8, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
8
Fix: Manifest IT fails with pinned seed (#7835)
#7850 opened Mar 10, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
7
Fix: OpenSearch queries are huge (azul-private#316) 1 review [process] Lead requested changes once
#7775 opened Feb 12, 2026 by nadove-ucsc Contributor Loading… 100+
@nadove-ucsc
13
OpenSearch queries include many redundant source IDs (#7644)
#7727 opened Jan 29, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
1
Make GitLab instance CIS level 2 compliant (#5990)
#6694 opened Nov 8, 2024 by dsotirho-ucsc Contributor • Draft 100+
1
@dsotirho-ucsc
2
Fix: Can't use curl to download a single manifest in one invocation (#5918) 4+ reviews [process] Lead requested changes four times or more API API change affecting callers
#6099 opened Mar 26, 2024 by dsotirho-ucsc Contributor Loading… 100+
1
@dsotirho-ucsc
107
ProTip! no:milestone will show everything without a milestone.