Issues

• Dask not working

  Aharoni-Lab/indeca#62 · Filter by author kaghi opened on Feb 17, 2026

• Explaining merge_sparse_regs and "combinatorial explosion"

  Aharoni-Lab/indeca#60 · Filter by author kaghi opened on Jan 30, 2026

• Defining parameters for solve function in deconv.py

  Aharoni-Lab/indeca#59 · Filter by author kaghi opened on Jan 30, 2026

• Use of @property decorator in deconv.py

  Aharoni-Lab/indeca#57 · Filter by author kaghi opened on Jan 28, 2026
  3

• simplify config use/creation

  Aharoni-Lab/indeca#54 · Filter by author sneakers-the-rat opened on Jan 23, 2026

• ci: enable mypy and fail on mypy failures

  Aharoni-Lab/indeca#53 · Filter by author sneakers-the-rat opened on Jan 22, 2026

• "optimize more by doing row-scalling of Mw #114" - CI testing failing due to mismatch in type annotations

  Aharoni-Lab/indeca#51 · Filter by author kaghi opened on Jan 22, 2026

• rm "legacy" code

  Aharoni-Lab/indeca#50 · Filter by author sneakers-the-rat opened on Jan 22, 2026

• branch protection

  Aharoni-Lab/indeca#49 · Filter by author kaghi opened on Jan 22, 2026

• rm plotting from tests

  Aharoni-Lab/indeca#48 · Filter by author sneakers-the-rat opened on Jan 15, 2026

• rm tests without assertions or add assertions

  Aharoni-Lab/indeca#47 · Filter by author sneakers-the-rat opened on Jan 15, 2026

• repo is humongous

  Aharoni-Lab/indeca#46 · Filter by author sneakers-the-rat opened on Jan 15, 2026
  1

• scipy/sparse/_compressed.py is where a lot of compute time goes

  Aharoni-Lab/indeca#39 · Filter by author daharoni opened on Dec 15, 2025

• Removing test outputs from git

  Aharoni-Lab/indeca#36 · Filter by author daharoni opened on Dec 13, 2025

• Minian-bin Dashboard Implementation Plan

  documentationenhancement
  Aharoni-Lab/indeca#19 · Filter by author daharoni opened on Mar 13, 2025
  

• Suggestions for Improving Project Maintainability and Dissemination

  documentationenhancement
  Aharoni-Lab/indeca#7 · Filter by author daharoni opened on Dec 13, 2024